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EXTL3 exostosin like glycosyltransferase 3 [ Columba livia (rock pigeon) ]

Gene ID: 102088676, updated on 10-Mar-2024

Summary

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Gene symbol
EXTL3
Gene description
exostosin like glycosyltransferase 3
Locus tag
A306_14171
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973249.1 (796000..908460, complement)

NW_004973249.1Genomic Context describing neighboring genes Neighboring gene homeobox containing 1 Neighboring gene uncharacterized LOC110357721 Neighboring gene integrator complex subunit 9 Neighboring gene uncharacterized LOC110357722

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004973249 Unplaced Scaffold Reference Cliv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 3
Names
Exostosin-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Columba livia Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cliv_1.0 Primary Assembly

Genomic

  1. NW_004973249.1 Reference Cliv_1.0 Primary Assembly

    Range
    796000..908460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005500945.2 → XP_005501002.1  exostosin-like 3

    See identical proteins and their annotated locations for XP_005501002.1

    UniProtKB/TrEMBL
    A0A2I0LVW0
    Conserved Domains (3) summary
    pfam03016
    Location:190 → 500
    Exostosin; Exostosin family
    pfam07926
    Location:71 → 150
    TPR_MLP1_2; TPR/MLP1/MLP2-like protein
    pfam09258
    Location:663 → 900
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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