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BRCA1 BRCA1 DNA repair associated [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102121313, updated on 4-May-2022

Summary

Gene symbol
BRCA1
Gene description
BRCA1 DNA repair associated
See related
Ensembl:ENSMFAG00000043956
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
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Genomic context

See BRCA1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
24
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 16 NC_052270.1 (25193845..25280198)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 16 NC_022287.1 (54819680..54913260, complement)

Chromosome 16 - NC_052270.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 106A Neighboring gene coiled-coil domain containing 200 Neighboring gene NBR1 autophagy cargo receptor Neighboring gene Rho family GTPase 2 Neighboring gene vesicle amine transport 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
breast cancer type 1 susceptibility protein
Names
BRCA1 homologue
breast cancer 1, early onset
breast cancer type 1 susceptibility protein homolog
XP_005584406.2
XP_015293338.2
XP_015293339.2
XP_015293341.2
XP_045231856.1
XP_045231857.1
XP_045231858.1
XP_045231859.1
XP_045231860.1
XP_045231861.1
XP_045231862.1
XP_045231863.1
XP_045231864.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052270.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    25193845..25280198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005584349.3XP_005584406.2  breast cancer type 1 susceptibility protein isoform X1

  2. XM_045375923.1XP_045231858.1  breast cancer type 1 susceptibility protein isoform X3

  3. XM_045375928.1XP_045231863.1  breast cancer type 1 susceptibility protein isoform X8

    Conserved Domains (4) summary
    TIGR00599
    Location:22137
    rad18; DNA repair protein rad18
    cd16498
    Location:1865
    RING-HC_BRCA1; RING finger, HC subclass, found in breast cancer type 1 susceptibility protein (BRCA1) and similar proteins
    cd17721
    Location:616713
    BRCT_BRCA1_rpt2; second (C-terminal) BRCT domain of breast cancer type 1 susceptibility protein (BRCA1) and similar proteins
    cd17735
    Location:508604
    BRCT_BRCA1_rpt1; first BRCT domain of breast cancer type 1 susceptibility protein (BRCA1) and similar proteins
  4. XM_045375926.1XP_045231861.1  breast cancer type 1 susceptibility protein isoform X6

    Conserved Domains (4) summary
    TIGR00599
    Location:22137
    rad18; DNA repair protein rad18
    cd16498
    Location:1865
    RING-HC_BRCA1; RING finger, HC subclass, found in breast cancer type 1 susceptibility protein (BRCA1) and similar proteins
    cd17721
    Location:667764
    BRCT_BRCA1_rpt2; second (C-terminal) BRCT domain of breast cancer type 1 susceptibility protein (BRCA1) and similar proteins
    cd17735
    Location:559655
    BRCT_BRCA1_rpt1; first BRCT domain of breast cancer type 1 susceptibility protein (BRCA1) and similar proteins
  5. XM_045375922.1XP_045231857.1  breast cancer type 1 susceptibility protein isoform X2

  6. XM_045375927.1XP_045231862.1  breast cancer type 1 susceptibility protein isoform X7

  7. XM_045375924.1XP_045231859.1  breast cancer type 1 susceptibility protein isoform X4

  8. XM_015437855.2XP_015293341.2  breast cancer type 1 susceptibility protein isoform X1

  9. XM_045375925.1XP_045231860.1  breast cancer type 1 susceptibility protein isoform X5

  10. XM_015437852.2XP_015293338.2  breast cancer type 1 susceptibility protein isoform X1

  11. XM_045375921.1XP_045231856.1  breast cancer type 1 susceptibility protein isoform X1

  12. XM_015437853.2XP_015293339.2  breast cancer type 1 susceptibility protein isoform X1

  13. XM_045375929.1XP_045231864.1  breast cancer type 1 susceptibility protein isoform X9

    Conserved Domains (2) summary
    cd17721
    Location:469566
    BRCT_BRCA1_rpt2; second (C-terminal) BRCT domain of breast cancer type 1 susceptibility protein (BRCA1) and similar proteins
    cd17735
    Location:361457
    BRCT_BRCA1_rpt1; first BRCT domain of breast cancer type 1 susceptibility protein (BRCA1) and similar proteins

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001301366.1: Suppressed sequence

    Description
    NM_001301366.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.