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EXOC6 exocyst complex component 6 [ Sus scrofa (pig) ]

Gene ID: 102158067, updated on 4-Jul-2020

Summary

Official Symbol
EXOC6provided by VGNC
Official Full Name
exocyst complex component 6provided by VGNC
Primary source
VGNC:VGNC:87832
See related
Ensembl:ENSSSCG00000010473
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 5.2), kidney (RPKM 3.5) and 8 other tissues See more
Orthologs
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Genomic context

See EXOC6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
24
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 14 NC_010456.5 (104326943..104549638)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003613402.1 (4104..22489)

Chromosome 14 - NC_010456.5Genomic Context describing neighboring genes Neighboring gene kinesin family member 11 Neighboring gene hematopoietically expressed homeobox Neighboring gene S-adenosylmethionine decarboxylase proenzyme 2-like Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene cytochrome P450 family 26 subfamily A member 1

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General protein information

Preferred Names
exocyst complex component 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010456.5 Reference Sscrofa11.1 Primary Assembly

    Range
    104326943..104549638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021073792.1XP_020929451.1  exocyst complex component 6 isoform X1

    Conserved Domains (1) summary
    pfam04091
    Location:459775
    Sec15; Exocyst complex subunit Sec15-like
  2. XM_021073794.1XP_020929453.1  exocyst complex component 6 isoform X3

    Related
    ENSSSCP00000027348.2, ENSSSCT00000032502.3
    Conserved Domains (1) summary
    pfam04091
    Location:459765
    Sec15; Exocyst complex subunit Sec15-like
  3. XM_021073795.1XP_020929454.1  exocyst complex component 6 isoform X4

    Related
    ENSSSCP00000042391.2, ENSSSCT00000051724.2
    Conserved Domains (1) summary
    pfam04091
    Location:455761
    Sec15; Exocyst complex subunit Sec15-like
  4. XM_021073793.1XP_020929452.1  exocyst complex component 6 isoform X2

    Related
    ENSSSCP00000011162.3, ENSSSCT00000011461.4
    Conserved Domains (1) summary
    pfam04091
    Location:455771
    Sec15; Exocyst complex subunit Sec15-like
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