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SMAGP small cell adhesion glycoprotein [ Sus scrofa (pig) ]

Gene ID: 102160467, updated on 2-Oct-2018

Summary

Gene symbol
SMAGP
Gene description
small cell adhesion glycoprotein
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 51.1), lung (RPKM 48.0) and 8 other tissues See more
Orthologs

Genomic context

See SMAGP in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) Unplaced Scaffold NW_018085018.1 (139131..160570)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (17309510..17357618, complement)

NW_018085018.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 6 Neighboring gene chymotrypsin like elastase 1 Neighboring gene bridging integrator 2 Neighboring gene DAZ associated protein 2 Neighboring gene POU class 6 homeobox 1 Neighboring gene 60S acidic ribosomal protein P1 pseudogene Neighboring gene transcription factor CP2

Genomic regions, transcripts, and products

General protein information

Preferred Names
small cell adhesion glycoprotein

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NW_018085018.1 Reference Sscrofa11.1 Primary Assembly

    Range
    139131..160570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021081720.1XP_020937379.1  small cell adhesion glycoprotein

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