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LOC102217909 alpha-2,8-sialyltransferase 8F-like [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102217909, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102217909
Gene description
alpha-2,8-sialyltransferase 8F-like
See related
Ensembl:ENSXMAG00000028610
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC102217909 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
7
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 16 NC_036458.1 (6160483..6168080)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372190.1 (1692510..1697799)

Chromosome 16 - NC_036458.1Genomic Context describing neighboring genes Neighboring gene alpha-2,8-sialyltransferase 8F-like Neighboring gene alpha-2,8-sialyltransferase 8E-like Neighboring gene alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like Neighboring gene alpha-2,8-sialyltransferase 8F-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8F-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036458.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    6160483..6168080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005796754.2 → XP_005796811.1  alpha-2,8-sialyltransferase 8F-like

    UniProtKB/TrEMBL
    A0A3B5PYI6, A0A3B5QVG8
    Related
    ENSXMAP00000034822.1, ENSXMAT00000024848.1
    Conserved Domains (1) summary
    pfam00777
    Location:96 → 351
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases