U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

F13A1 coagulation factor XIII A chain [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102253096, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
F13A1
Gene description
coagulation factor XIII A chain
Locus tag
D623_10023391
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005361459.1 (3339560..3534713, complement)

NW_005361459.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA pseudogene Neighboring gene neuritin 1 Neighboring gene uncharacterized LOC106726670 Neighboring gene uncharacterized LOC106726666 Neighboring gene pre-mRNA-processing factor 6 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005361459.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Seim I, et al. Nat Commun, 2013. PMID 23962925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation, fibrin clot formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
coagulation factor XIII A chain

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005361459.1 Reference ASM41265v1

    Range
    3339560..3534713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014542409.1 → XP_014397895.1  coagulation factor XIII A chain

    UniProtKB/TrEMBL
    S7N1C8
    Conserved Domains (4) summary
    smart00460
    Location:309 → 400
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:280 → 408
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:48 → 164
    Transglut_N; Transglutaminase family
    pfam00927
    Location:519 → 623
    Transglut_C; Transglutaminase family, C-terminal ig like domain

  2. XM_005869651.2 → XP_005869713.1  coagulation factor XIII A chain

    See identical proteins and their annotated locations for XP_005869713.1

    UniProtKB/TrEMBL
    S7N1C8
    Conserved Domains (4) summary
    smart00460
    Location:309 → 400
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:280 → 408
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:48 → 164
    Transglut_N; Transglutaminase family
    pfam00927
    Location:519 → 623
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.