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F13A1 coagulation factor XIII A chain [ Bos mutus (wild yak) ]

Gene ID: 102282528, updated on 10-Mar-2024

Summary

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Gene symbol
F13A1
Gene description
coagulation factor XIII A chain
Locus tag
M91_12590
See related
Ensembl:ENSBMUG00000019970
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005393263.1 (345513..489569)

NW_005393263.1Genomic Context describing neighboring genes Neighboring gene lymphocyte antigen 86 Neighboring gene neuritin 1 Neighboring gene lymphokine-activated killer T-cell-originated protein kinase pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005393263.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation, fibrin clot formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coagulation factor XIII A chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005393263.1 Reference BosGru_v2.0 Primary Assembly

    Range
    345513..489569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005891153.2 → XP_005891215.1  coagulation factor XIII A chain

    See identical proteins and their annotated locations for XP_005891215.1

    UniProtKB/TrEMBL
    L8IUK1
    Related
    ENSBMUP00000026582.1, ENSBMUT00000030610.1
    Conserved Domains (4) summary
    smart00460
    Location:309 → 400
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:280 → 408
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:47 → 164
    Transglut_N; Transglutaminase family
    pfam00927
    Location:521 → 623
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
Heading Accession and Version

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