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MIR6853 microRNA 6853 [ Homo sapiens (human) ]

Gene ID: 102466201, updated on 10-Oct-2023

Summary

Official Symbol
MIR6853provided by HGNC
Official Full Name
microRNA 6853provided by HGNC
Primary source
HGNC:HGNC:49945
See related
Ensembl:ENSG00000273945 miRBase:MI0022699; AllianceGenome:HGNC:49945
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
hsa-mir-6853
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR6853 in Genome Data Viewer
Location:
9p13.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (35732922..35732995)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (35753602..35753675)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (35732919..35732992)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene skeletal muscle cis-regulatory module in TPM2 intron Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19873 Neighboring gene tropomyosin 2 Neighboring gene talin 1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:35710778-35711977 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28332 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:35714704-35715608 Neighboring gene microRNA 6852 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:35726478-35727190 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:35727191-35727904 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28333 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28334 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19874 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19875 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28335 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28336 Neighboring gene cAMP responsive element binding protein 3 Neighboring gene glucosylceramidase beta 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19876 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19877 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19878 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:35752887-35754086 Neighboring gene RGP1 homolog, RAB6A GEF complex partner 1 Neighboring gene microseminoprotein, prostate associated

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_106912.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL133410
    Related
    ENST00000619642.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    35732922..35732995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    35753602..35753675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)