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PDXDC1 pyridoxal dependent decarboxylase domain containing 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102477847, updated on 5-Nov-2020

Summary

Gene symbol
PDXDC1
Gene description
pyridoxal dependent decarboxylase domain containing 1
Locus tag
TREES_T100018430
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
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Genomic context

See PDXDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159657.1 (5880341..5947673, complement)

NW_006159657.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 238 Neighboring gene RRN3 homolog, RNA polymerase I transcription factor Neighboring gene N-terminal asparagine amidase Neighboring gene small nucleolar RNA SNORA40 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene MPV17 mitochondrial inner membrane protein like Neighboring gene U1 small nuclear ribonucleoprotein C pseudogene

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006159657 Unplaced Scaffold Reference TupChi_1.0

General protein information

Preferred Names
pyridoxal-dependent decarboxylase domain-containing protein 1
Names
Pyridoxal-dependent decarboxylase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159657.1 Reference TupChi_1.0

    Range
    5880341..5947673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014587078.2XP_014442564.1  pyridoxal-dependent decarboxylase domain-containing protein 1

    Conserved Domains (1) summary
    cl18945
    Location:168390
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
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