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DCAF6 DDB1 and CUL4 associated factor 6 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102478549, updated on 10-Mar-2024

Summary

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Gene symbol
DCAF6
Gene description
DDB1 and CUL4 associated factor 6
Locus tag
TREES_T100015917
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159673.1 (1972087..2108153)

NW_006159673.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102470681 Neighboring gene mitochondrial pyruvate carrier 2 Neighboring gene dnaJ homolog subfamily C member 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene G protein-coupled receptor 161 Neighboring gene TOR signaling pathway regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159673 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159673.1 Reference TupChi_1.0

    Range
    1972087..2108153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027771257.1 → XP_027627058.1  DDB1- and CUL4-associated factor 6 isoform X3

  2. XM_027771258.1 → XP_027627059.1  DDB1- and CUL4-associated factor 6 isoform X4

  3. XM_027771259.1 → XP_027627060.1  DDB1- and CUL4-associated factor 6 isoform X5

  4. XM_027771260.1 → XP_027627061.1  DDB1- and CUL4-associated factor 6 isoform X6

  5. XM_027771255.1 → XP_027627056.1  DDB1- and CUL4-associated factor 6 isoform X1

  6. XM_027771256.1 → XP_027627057.1  DDB1- and CUL4-associated factor 6 isoform X2

Nucleotide Protein
Heading Accession and Version

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