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TLR3 toll like receptor 3 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102484558, updated on 10-Mar-2024

Summary

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Gene symbol
TLR3
Gene description
toll like receptor 3
Locus tag
TREES_T100012427
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006160208.1 (3601693..3614438)

NW_006160208.1Genomic Context describing neighboring genes Neighboring gene PDZ and LIM domain 3 Neighboring gene uncharacterized LOC102484256 Neighboring gene uncharacterized LOC114010021 Neighboring gene sorbin and SH3 domain containing 2 Neighboring gene uncharacterized LOC102484969 Neighboring gene family with sequence similarity 149 member A Neighboring gene cytochrome P450 4V2 Neighboring gene small nucleolar RNA SNORA27

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006160208 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of toll-like receptors (TLRs) in the Chinese tree shrew (Tupaia belangeri chinensis). Yu D, et al. Dev Comp Immunol, 2016 Jul. PMID 26923770

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006160208.1 Reference TupChi_1.0

    Range
    3601693..3614438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006160465.2 → XP_006160527.1  toll-like receptor 3

    UniProtKB/TrEMBL
    A0A140H1B7
    Conserved Domains (5) summary
    smart00255
    Location:769 → 914
    TIR; Toll - interleukin 1 - resistance
    cd00116
    Location:70 → 301
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:91 → 114
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:288 → 343
    LRR_8; Leucine rich repeat
    cl15307
    Location:659 → 699
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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