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TPCN1 two pore segment channel 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102495039, updated on 10-Mar-2024

Summary

Gene symbol
TPCN1
Gene description
two pore segment channel 1
Locus tag
TREES_T100009949
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159817.1 (1309264..1408555, complement)

NW_006159817.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S6-like Neighboring gene solute carrier family 8 member B1 Neighboring gene U6 spliceosomal RNA Neighboring gene IQ motif containing D Neighboring gene RBPJ interacting and tubulin associated 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006159817 Unplaced Scaffold Reference TupChi_1.0

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables voltage-gated channel activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
two pore calcium channel protein 1
Names
Two pore calcium channel protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159817.1 Reference TupChi_1.0

    Range
    1309264..1408555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027773129.1XP_027628930.1  two pore calcium channel protein 1

    UniProtKB/TrEMBL
    L9KLU6