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LOC102546557 uncharacterized LOC102546557 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102546557, updated on 5-Apr-2021

Summary

Symbol
LOC102546557provided by RGD
Full Name
uncharacterized LOC102546557provided by RGD
Primary source
RGD:7661434
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Muscle (RPKM 7.5), Spleen (RPKM 1.1) and 3 other tissues See more
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Genomic context

See LOC102546557 in Genome Data Viewer
Location:
4q24
Exon count:
3
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (77990039..77994867, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (78674234..78692450, complement)

Chromosome 4 - NC_051339.1Genomic Context describing neighboring genes Neighboring gene hypothetical LOC100363435 Neighboring gene seminal vesicle secretory protein 1 Neighboring gene glycoprotein nmb Neighboring gene mitochondrial assembly of ribosomal large subunit 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051339.1 Reference mRatBN7.2 Primary Assembly

    Range
    77990039..77994867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_592107.2 RNA Sequence

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