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LOC102550331 uncharacterized LOC102550331 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102550331, updated on 29-Feb-2024

Summary

Symbol
LOC102550331provided by RGD
Full Name
uncharacterized LOC102550331provided by RGD
Primary source
RGD:7525252
See related
AllianceGenome:RGD:7525252
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
Xq14
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (35593466..35603968)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (31961335..31972160)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (33695393..33709764)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA76 Neighboring gene proteasome 20S subunit beta 6, pseudogene 2 Neighboring gene ribosomal protein L31, pseudogene 12 Neighboring gene solute carrier family 25 member 39, pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    35593466..35603968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005498394.2 RNA Sequence