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Idi1-ps1 isopentenyl-diphosphate delta isomerase, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 102635781, updated on 8-Feb-2024

Summary

Official Symbol
Idi1-ps1provided by MGI
Official Full Name
isopentenyl-diphosphate delta isomerase, pseudogene 1provided by MGI
Primary source
MGI:MGI:3649894
See related
AllianceGenome:MGI:3649894
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13502; Gm38481
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Genomic context

Location:
2 C1.1; 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (53584382..53586882, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (53694340..53696857, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_04502 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_04503 Neighboring gene predicted gene 13503 Neighboring gene STARR-positive B cell enhancer mm9_chr2:53527692-53527992 Neighboring gene predicted gene, 23315 Neighboring gene STARR-seq mESC enhancer starr_04504 Neighboring gene STARR-seq mESC enhancer starr_04505 Neighboring gene STARR-seq mESC enhancer starr_04506 Neighboring gene reprimo, TP53 dependent G2 arrest mediator candidate

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Other Names

  • isopentenyl-diphosphate Delta-isomerase 1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables isopentenyl-diphosphate delta-isomerase activity ISO
Inferred from Sequence Orthology
more info
 
enables magnesium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables manganese ion binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in peroxisome ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_169308.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL844209

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    53584382..53586882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001378665.1: Suppressed sequence

    Description
    NM_001378665.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.