Format

Send to:

Choose Destination

LOC102638047 sp110 nuclear body protein-like [ Mus musculus (house mouse) ]

Gene ID: 102638047, updated on 23-Jun-2021

Summary

Gene symbol
LOC102638047
Gene description
sp110 nuclear body protein-like
See related
Ensembl:ENSMUSG00000079808
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC102638047 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 Unlocalized Scaffold NT_166282.1 (122405..147852, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 Unlocalized Scaffold NT_166282.1 (122405..147904, complement)

NT_166282.1Genomic Context describing neighboring genes Neighboring gene odorant receptor 131-2-like Neighboring gene uncharacterized LOC100041877 Neighboring gene uncharacterized LOC102637495 Neighboring gene uncharacterized LOC102637781

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
sp110 nuclear body protein-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001378739.1NP_001365668.1  sp110 nuclear body protein-like isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC168977
    Related
    ENSMUSP00000111587.3, ENSMUST00000115924.3
    Conserved Domains (2) summary
    pfam01342
    Location:361433
    SAND; SAND domain
    pfam03172
    Location:8106
    HSR; HSR domain
  2. NM_001378740.1NP_001365669.1  sp110 nuclear body protein-like isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC168977
    Conserved Domains (1) summary
    pfam03172
    Location:8106
    HSR; HSR domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NT_166282.1 Reference GRCm39 C57BL/6J

    Range
    122405..147852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249829.4XP_011248131.1  sp110 nuclear body protein-like isoform X4

    Conserved Domains (1) summary
    pfam03172
    Location:31129
    HSR; HSR domain
  2. XM_011249825.4XP_011248127.1  sp110 nuclear body protein-like isoform X1

    Conserved Domains (2) summary
    pfam01342
    Location:387459
    SAND; SAND domain
    pfam03172
    Location:31129
    HSR; HSR domain
  3. XM_011249827.4XP_011248129.1  sp110 nuclear body protein-like isoform X2

    Conserved Domains (2) summary
    pfam01342
    Location:383455
    SAND; SAND domain
    pfam03172
    Location:31129
    HSR; HSR domain
  4. XM_011249828.4XP_011248130.1  sp110 nuclear body protein-like isoform X3

    Conserved Domains (3) summary
    PHA03377
    Location:162355
    PHA03377; EBNA-3C; Provisional
    pfam01342
    Location:333405
    SAND; SAND domain
    pfam03172
    Location:31129
    HSR; HSR domain
Support Center