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TAMALIN trafficking regulator and scaffold protein tamalin [ Pteropus alecto (black flying fox) ]

Gene ID: 102884874, updated on 30-Mar-2024

Summary

Gene symbol
TAMALIN
Gene description
trafficking regulator and scaffold protein tamalin
Locus tag
PAL_GLEAN10005112
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Also known as
GRASP
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006430043.1 (2344984..2351867, complement)

NW_006430043.1Genomic Context describing neighboring genes Neighboring gene autophagy related 101 Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene activin A receptor type 1B Neighboring gene activin A receptor like type 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006430043 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
general receptor for phosphoinositides 1-associated scaffold protein
Names
General receptor for phosphoinositides 1-associated scaffold protein
general receptor for phosphoinositides 1 associated scaffold protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006430043.1 Reference ASM32557v1 Primary Assembly

    Range
    2344984..2351867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006904576.3XP_006904638.1  general receptor for phosphoinositides 1-associated scaffold protein isoform X1

    See identical proteins and their annotated locations for XP_006904638.1

    UniProtKB/TrEMBL
    L5L5L4
    Conserved Domains (1) summary
    cd00992
    Location:99184
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
  2. XM_025045412.1XP_024901180.1  general receptor for phosphoinositides 1-associated scaffold protein isoform X2

    Conserved Domains (1) summary
    cd00992
    Location:455
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...