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EXTL3 exostosin like glycosyltransferase 3 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102945736, updated on 10-Mar-2024

Summary

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Gene symbol
EXTL3
Gene description
exostosin like glycosyltransferase 3
Locus tag
UY3_10306
See related
EnsemblRapid:ENSCMYG00015024903
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 3 NC_057851.1 (6767166..6992548)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 3 NC_051243.1 (6767176..6992758)

Chromosome 3 - NC_057851.1Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 3 Neighboring gene U1 spliceosomal RNA Neighboring gene integrator complex subunit 9 Neighboring gene homeobox containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 3
Names
Exostosin-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057851.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    6767166..6992548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037893835.2 → XP_037749763.1  exostosin-like 3

    UniProtKB/TrEMBL
    M7BAE7
    Conserved Domains (3) summary
    COG1196
    Location:86 → 145
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:190 → 500
    Exostosin; Exostosin family
    pfam09258
    Location:663 → 900
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_037893836.2 → XP_037749764.1  exostosin-like 3

    UniProtKB/TrEMBL
    M7BAE7
    Related
    ENSCMYP00015038031.1, ENSCMYT00015046816.1
    Conserved Domains (3) summary
    COG1196
    Location:86 → 145
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:190 → 500
    Exostosin; Exostosin family
    pfam09258
    Location:663 → 900
    Glyco_transf_64; Glycosyl transferase family 64 domain

  3. XM_043542079.1 → XP_043398014.1  exostosin-like 3

    UniProtKB/TrEMBL
    M7BAE7
    Conserved Domains (3) summary
    COG1196
    Location:86 → 145
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:190 → 500
    Exostosin; Exostosin family
    pfam09258
    Location:663 → 900
    Glyco_transf_64; Glycosyl transferase family 64 domain

  4. XM_037893838.2 → XP_037749766.1  exostosin-like 3

    UniProtKB/TrEMBL
    M7BAE7
    Conserved Domains (3) summary
    COG1196
    Location:86 → 145
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:190 → 500
    Exostosin; Exostosin family
    pfam09258
    Location:663 → 900
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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