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rida reactive intermediate imine deaminase A homolog [ Callorhinchus milii (elephant shark) ]

Gene ID: 103179694, updated on 11-Mar-2024

Summary

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Gene symbol
rida
Gene description
reactive intermediate imine deaminase A homolog
See related
Ensembl:ENSCMIG00000002755
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704743.1 (120374278..120374621)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890090.1 (2762803..2769310, complement)

NW_024704743.1Genomic Context describing neighboring genes Neighboring gene NIPA-like protein 2 Neighboring gene POP1 homolog, ribonuclease P/MRP subunit Neighboring gene glutamate-rich protein 5-like Neighboring gene small nucleolar RNA SNORA72 Neighboring gene ribosomal protein L30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in organonitrogen compound catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-iminobutanoate/2-iminopropanoate deaminase
Names
ribonuclease
NP_001279659.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001292730.1 → NP_001279659.1  2-iminobutanoate/2-iminopropanoate deaminase

    See identical proteins and their annotated locations for NP_001279659.1

    Status: PROVISIONAL

    Source sequence(s)
    JX212074
    UniProtKB/TrEMBL
    K4FU80, K4GBJ3, K4GC04
    Conserved Domains (1) summary
    TIGR00004
    Location:6 → 129
    TIGR00004; reactive intermediate/imine deaminase

RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704743.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    120374278..120374621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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