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LOC103346593 carnitine O-palmitoyltransferase 1, liver isoform [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 103346593, updated on 9-Nov-2023

Summary

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Gene symbol
LOC103346593
Gene description
carnitine O-palmitoyltransferase 1, liver isoform
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
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Genomic context

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See LOC103346593 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026256938.1 (350986..582585, complement)

NW_026256938.1Genomic Context describing neighboring genes Neighboring gene carnitine O-palmitoyltransferase 1, liver isoform Neighboring gene cysteine-rich, acidic integral membrane protein Neighboring gene testis expressed metallothionein like protein Neighboring gene galanin and GMAP prepropeptide Neighboring gene small nucleolar RNA SNORA17 Neighboring gene uncharacterized LOC127485137 Neighboring gene translation initiation factor IF-2 Neighboring gene carnitine palmitoyltransferase 1A Neighboring gene mitochondrial ribosomal protein L21 Neighboring gene immunoglobulin mu DNA binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026256938 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, liver isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NW_026256938.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    350986..582585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051827857.1 → XP_051683817.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X1

  2. XM_051827856.1 → XP_051683816.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X1

  3. XM_051827865.1 → XP_051683825.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X1

  4. XM_051827862.1 → XP_051683822.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X1

  5. XM_051827863.1 → XP_051683823.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X1

  6. XM_051827858.1 → XP_051683818.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X2

  7. XM_051827861.1 → XP_051683821.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X5

  8. XM_051827864.1 → XP_051683824.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X1

  9. XM_051827866.1 → XP_051683826.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X1

  10. XM_051827859.1 → XP_051683819.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X3

  11. XM_051827860.1 → XP_051683820.1  carnitine O-palmitoyltransferase 1, liver isoform isoform X4

Nucleotide Protein
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