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Pomt1 protein O-mannosyltransferase 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103727607, updated on 11-Mar-2024

Summary

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Gene symbol
Pomt1
Gene description
protein O-mannosyltransferase 1
See related
Ensembl:ENSNGAG00000008179
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008331486.1 (5853744..5875116, complement)

NW_008331486.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L14 pseudogene Neighboring gene SWI5 homologous recombination repair protein Neighboring gene uridine-cytidine kinase 1 Neighboring gene small nucleolar RNA SNORD62 Neighboring gene proline rich coiled-coil 2B Neighboring gene small nucleolar RNA SNORD62

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008331486 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008331486.1 Reference S.galili_v1.0 Primary Assembly

    Range
    5853744..5875116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008825548.2 → XP_008823770.1  protein O-mannosyl-transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6W3Y4
    Conserved Domains (1) summary
    COG1928
    Location:14 → 707
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

  2. XM_008825567.3 → XP_008823789.1  protein O-mannosyl-transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6W3Y4
    Related
    ENSNGAP00000005687.1, ENSNGAT00000009877.1
    Conserved Domains (1) summary
    COG1928
    Location:14 → 720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

  3. XM_008825558.3 → XP_008823780.1  protein O-mannosyl-transferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C6W3Y4
    Conserved Domains (1) summary
    COG1928
    Location:14 → 698
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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