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Cntf ciliary neurotrophic factor [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103733344, updated on 11-Mar-2024

Summary

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Gene symbol
Cntf
Gene description
ciliary neurotrophic factor
See related
Ensembl:ENSNGAG00000010892
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008337142.1 (1144549..1148396, complement)

NW_008337142.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 5B3-like Neighboring gene centriole, cilia and spindle-associated protein-like Neighboring gene glycine N-acyltransferase-like protein Keg1 Neighboring gene ZFP91 zinc finger protein, atypical E3 ubiquitin ligase Neighboring gene leupaxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008337142 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ciliary neurotrophic factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in astrocyte activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ciliary neurotrophic factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of neuron apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axon regeneration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of tyrosine phosphorylation of STAT protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ciliary neurotrophic factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008337142.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1144549..1148396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008832166.3 → XP_008830388.1  ciliary neurotrophic factor

    UniProtKB/TrEMBL
    A0A8C6QRS6
    Related
    ENSNGAP00000007682.1, ENSNGAT00000013170.1
    Conserved Domains (1) summary
    pfam01110
    Location:1 → 191
    CNTF; Ciliary neurotrophic factor
Nucleotide Protein
Heading Accession and Version

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