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FAM88E family with sequence similarity 88 member E [ Homo sapiens (human) ]

Gene ID: 103908605, updated on 10-Oct-2023

Summary

Official Symbol
FAM88Eprovided by HGNC
Official Full Name
family with sequence similarity 88 member Eprovided by HGNC
Primary source
HGNC:HGNC:56161
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in skin (RPKM 4.1), kidney (RPKM 2.9) and 24 other tissues See more
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Genomic context

See FAM88E in Genome Data Viewer
Location:
9p11.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (42567859..42569349, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (44120611..44122101, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (44401770..44403260)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene RBPJ pseudogene 6 Neighboring gene NANOG hESC enhancer GRCh37_chr9:44436970-44437511 Neighboring gene CNTNAP3 pseudogene 8 Neighboring gene uncharacterized LOC101927827 Neighboring gene fibroblast growth factor 7 pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126050.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX088651

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    42567859..42569349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    44120611..44122101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)