U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01151 long intergenic non-protein coding RNA 1151 [ Homo sapiens (human) ]

Gene ID: 104266958, updated on 10-Oct-2023

Summary

Official Symbol
LINC01151provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1151provided by HGNC
Primary source
HGNC:HGNC:49471
See related
AllianceGenome:HGNC:49471
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC01151 in Genome Data Viewer
Location:
8q24.13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (122670385..122694106, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (123801569..123825303, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (123682624..123706345, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375733 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:123391043-123391713 Neighboring gene smooth muscle induced lncRNA, enhancer of proliferation Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:123479282-123479790 Neighboring gene uncharacterized LOC107986972 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr8:123501108-123501994 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19485 Neighboring gene Sharpr-MPRA regulatory region 11925 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27851 Neighboring gene small nucleolar RNA U13 Neighboring gene Sharpr-MPRA regulatory region 1583 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:123701812-123703011 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:123705641-123706840 Neighboring gene uncharacterized LOC107986904 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27852 Neighboring gene Sharpr-MPRA regulatory region 2746 Neighboring gene hESC enhancers GRCh37_chr8:123770608-123771162 and GRCh37_chr8:123771163-123771718 Neighboring gene cyclin dependent kinase 5 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126348.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC100872

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    122670385..122694106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    123801569..123825303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)