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itpka inositol-trisphosphate 3-kinase A [ Larimichthys crocea (large yellow croaker) ]

Gene ID: 104922127, updated on 12-Mar-2024

Summary

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Gene symbol
itpka
Gene description
inositol-trisphosphate 3-kinase A
Locus tag
EH28_12942
See related
Ensembl:ENSLCRG00005014802
Gene type
protein coding
RefSeq status
MODEL
Organism
Larimichthys crocea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: XXIV
Exon count:
7
Annotation release Status Assembly Chr Location
102 current L_crocea_2.0 (GCF_000972845.2) XXIV NC_040034.1 (10695571..10706192, complement)
101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609555.1 (656959..667260)

Chromosome XXIV - NC_040034.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II associated protein 1 Neighboring gene leukocyte receptor tyrosine kinase Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene isovaleryl-CoA dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing of the perciform fish Larimichthys crocea provides insights into molecular and genetic mechanisms of stress adaptation. Ao J, et al. PLoS Genet, 2015 Apr. PMID 25835551, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-trisphosphate 3-kinase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference L_crocea_2.0 Primary Assembly

Genomic

  1. NC_040034.1 Reference L_crocea_2.0 Primary Assembly

    Range
    10695571..10706192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010734873.3 → XP_010733175.1  inositol-trisphosphate 3-kinase A

    See identical proteins and their annotated locations for XP_010733175.1

    UniProtKB/TrEMBL
    A0A6G0IEK8
    Related
    ENSLCRP00005038075.1, ENSLCRT00005038773.1
    Conserved Domains (1) summary
    pfam03770
    Location:220 → 431
    IPK; Inositol polyphosphate kinase
Nucleotide Protein
Heading Accession and Version

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