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cct8 chaperonin containing TCP1, subunit 8 (theta) [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104964672, updated on 12-Mar-2024

Summary

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Gene symbol
cct8
Gene description
chaperonin containing TCP1, subunit 8 (theta)
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Also known as
TCP
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011369945.1 (9512092..9520894)

NW_011369945.1Genomic Context describing neighboring genes Neighboring gene phospholipid-transporting ATPase ID-like Neighboring gene uncharacterized LOC104964673 Neighboring gene transmembrane and immunoglobulin domain containing 1 Neighboring gene aldolase C, fructose-bisphosphate, b Neighboring gene ribosomal protein S6 kinase related b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011369945.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the cytoplasmic chaperonin containing TCP-1 from the Antarctic fish Notothenia coriiceps. Pucciarelli S, et al. Extremophiles, 2006 Dec. PMID 16770691

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-complex protein 1 subunit theta
Names
chaperonin containing TCP1 subunit 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001303290.1 → NP_001290219.1  T-complex protein 1 subunit theta

    See identical proteins and their annotated locations for NP_001290219.1

    Status: PROVISIONAL

    Source sequence(s)
    AY823273
    UniProtKB/TrEMBL
    Q2VTM6
    Conserved Domains (2) summary
    TIGR02346
    Location:10 → 538
    chap_CCT_theta; T-complex protein 1, theta subunit
    pfam00118
    Location:39 → 528
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family

RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011369945.1 Reference NC01 Primary Assembly

    Range
    9512092..9520894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010793517.1 → XP_010791819.1  T-complex protein 1 subunit theta isoform X1

    See identical proteins and their annotated locations for XP_010791819.1

    UniProtKB/TrEMBL
    A0A6I9PL39
    Conserved Domains (2) summary
    TIGR02346
    Location:10 → 538
    chap_CCT_theta; T-complex protein 1, theta subunit
    pfam00118
    Location:39 → 528
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family

  2. XM_010793518.1 → XP_010791820.1  T-complex protein 1 subunit theta isoform X1

    See identical proteins and their annotated locations for XP_010791820.1

    UniProtKB/TrEMBL
    A0A6I9PL39
    Conserved Domains (2) summary
    TIGR02346
    Location:10 → 538
    chap_CCT_theta; T-complex protein 1, theta subunit
    pfam00118
    Location:39 → 528
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family

  3. XM_010793519.1 → XP_010791821.1  T-complex protein 1 subunit theta isoform X2

    Conserved Domains (2) summary
    TIGR02346
    Location:10 → 538
    chap_CCT_theta; T-complex protein 1, theta subunit
    pfam00118
    Location:39 → 528
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family
Nucleotide Protein
Heading Accession and Version

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