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tfa transferrin-a [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104965043, updated on 12-Mar-2024

Summary

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Gene symbol
tfa
Gene description
transferrin-a
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Also known as
tf
Orthologs
zebrafish all
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Genomic context

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See tfa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011369945.1 (23857337..23864240)

NW_011369945.1Genomic Context describing neighboring genes Neighboring gene tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like Neighboring gene uncharacterized LOC104965046 Neighboring gene uncharacterized LOC104965045 Neighboring gene ATP binding cassette subfamily A member 12 Neighboring gene uncharacterized LOC104965042 Neighboring gene Rho related BTB domain containing 2 Neighboring gene UBX domain protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011369945.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure and expression of genes involved in transport and storage of iron in red-blooded and hemoglobin-less antarctic notothenioids. Scudiero R, et al. Gene, 2007 Aug 1. PMID 17570620

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in antibacterial humoral response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serotransferrin-like; transferrin-a
Names
transferrin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001303296.1 → NP_001290225.1  transferrin-a precursor

    See identical proteins and their annotated locations for NP_001290225.1

    Status: PROVISIONAL

    Source sequence(s)
    AM419437
    UniProtKB/TrEMBL
    A0A6I9Q3E3, A6PYU1
    Conserved Domains (2) summary
    smart00094
    Location:339 → 670
    TR_FER; Transferrin
    cl21456
    Location:338 → 669
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily

RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011369945.1 Reference NC01 Primary Assembly

    Range
    23857337..23864240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010793984.1 → XP_010792286.1  serotransferrin-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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