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rab42b RAB42, member RAS oncogene family [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104968293, updated on 12-Mar-2024

Summary

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Gene symbol
rab42b
Gene description
RAB42, member RAS oncogene family
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Also known as
rab42
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011371237.1 (233574..235879, complement)

NW_011371237.1Genomic Context describing neighboring genes Neighboring gene cell adhesion molecule 4 Neighboring gene CTP synthase 1-like Neighboring gene TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011371237.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative Ras-related protein Rab-42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011371237.1 Reference NC01 Primary Assembly

    Range
    233574..235879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010797874.1 → XP_010796176.1  putative Ras-related protein Rab-42

    UniProtKB/TrEMBL
    A0A6I9Q7B0
    Conserved Domains (2) summary
    smart00175
    Location:10 → 176
    RAB; Rab subfamily of small GTPases
    cl21455
    Location:8 → 193
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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