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desi1b desumoylating isopeptidase 1b [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104968299, updated on 12-Mar-2024

Summary

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Gene symbol
desi1b
Gene description
desumoylating isopeptidase 1b
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011335324.1 (36993..39057, complement)

NW_011335324.1Genomic Context describing neighboring genes Neighboring gene Josephin domain containing 1 Neighboring gene uncharacterized LOC104968281 Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 6 Neighboring gene uncharacterized LOC104968328 Neighboring gene X-ray repair cross-complementing protein 6-like Neighboring gene gap junction alpha-10 protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011335324.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification by small protein removal IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
desumoylating isopeptidase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011335324.1 Reference NC01 Primary Assembly

    Range
    36993..39057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010797881.1 → XP_010796183.1  desumoylating isopeptidase 1-like

    UniProtKB/TrEMBL
    A0A6I9Q7X5
    Conserved Domains (1) summary
    pfam05903
    Location:7 → 138
    Peptidase_C97; PPPDE putative peptidase domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases