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hsf5 heat shock transcription factor family member 5 [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104968315, updated on 12-Mar-2024

Summary

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Gene symbol
hsf5
Gene description
heat shock transcription factor family member 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
Orthologs
human zebrafish all
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Genomic context

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See hsf5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011371317.1 (13907..17192, complement)

NW_011371317.1Genomic Context describing neighboring genes Neighboring gene SPT4 homolog, DSIF elongation factor subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011371317.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock factor protein 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011371317.1 Reference NC01 Primary Assembly

    Range
    13907..17192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010797893.1 → XP_010796195.1  heat shock factor protein 5-like

    UniProtKB/TrEMBL
    A0A6I9Q7K5
    Conserved Domains (1) summary
    pfam00447
    Location:57 → 153
    HSF_DNA-bind; HSF-type DNA-binding
Nucleotide Protein
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Gene LinkOut

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