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Gm41853 predicted gene, 41853 [ Mus musculus (house mouse) ]

Gene ID: 105246582, updated on 8-Feb-2024

Summary

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Official Symbol
Gm41853provided by MGI
Official Full Name
predicted gene, 41853provided by MGI
Primary source
MGI:MGI:5624738
See related
AllianceGenome:MGI:5624738
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
19 C3; 19
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (44270877..44272136)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (44282438..44283697)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_46222 Neighboring gene stearoyl-coenzyme A desaturase pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr19:44341455-44341756 Neighboring gene predicted gene, 54046 Neighboring gene predicted gene, 35183 Neighboring gene STARR-seq mESC enhancer starr_46225 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:44358612-44358721 Neighboring gene STARR-positive B cell enhancer ABC_E4283 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:44368225-44368334 Neighboring gene STARR-positive B cell enhancer ABC_E2528 Neighboring gene stearoyl-Coenzyme A desaturase 2 Neighboring gene microRNA 5114 Neighboring gene STARR-seq mESC enhancer starr_46229 Neighboring gene stearoyl-coenzyme A desaturase 4 Neighboring gene STARR-seq mESC enhancer starr_46230

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    44270877..44272136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_877874.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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