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LOC105369999 uncharacterized LOC105369999 [ Homo sapiens (human) ]

Gene ID: 105369999, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105369999
Gene description
uncharacterized LOC105369999
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
12q24.21
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (114733755..114734755, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (114710829..114711829, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903026 Neighboring gene NANOG hESC enhancer GRCh37_chr12:115079511-115080012 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:115109316-115109876 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:115109877-115110436 Neighboring gene NANOG hESC enhancer GRCh37_chr12:115113537-115114038 Neighboring gene TBX3 promoter region Neighboring gene VISTA enhancer hs483 Neighboring gene Sharpr-MPRA regulatory region 166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115134740-115135593 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115135594-115136448 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115136449-115137301 Neighboring gene TBX3 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115138140-115138949 Neighboring gene T-box transcription factor 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115173261-115174104 Neighboring gene small nucleolar RNA SNORA27 Neighboring gene Sharpr-MPRA regulatory region 2968 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115223243-115223742 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115237130-115237630 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115237631-115238131 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115253275-115253775 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:115255288-115255810 Neighboring gene uncharacterized LOC124903079

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    114733755..114734755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_945379.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    114710829..114711829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082918.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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