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LINC02767 long intergenic non-protein coding RNA 2767 [ Homo sapiens (human) ]

Gene ID: 105372883, updated on 10-Oct-2023

Summary

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Official Symbol
LINC02767provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2767provided by HGNC
Primary source
HGNC:HGNC:54287
See related
AllianceGenome:HGNC:54287
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
1q32.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (207958991..207968142)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (207205731..207214885)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (208132336..208141487)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene MIR29B2 and MIR29C host gene Neighboring gene Sharpr-MPRA regulatory region 9321 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2453 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1775 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2454 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2455 Neighboring gene uncharacterized LOC148696 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2456 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2457 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1776 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2460 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2459 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2458 Neighboring gene uncharacterized LOC107985253 Neighboring gene NANOG hESC enhancer GRCh37_chr1:208091350-208091981 Neighboring gene CD34 molecule Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:208131807-208132308 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:208132309-208132808 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2461 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2462 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:208137516-208138045 Neighboring gene plexin A2 Neighboring gene uncharacterized LOC105372887 Neighboring gene uncharacterized LOC124904499

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_167982.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL356275

  2. NR_167983.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL356275

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    207958991..207968142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    207205731..207214885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases