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LOC105375151 uncharacterized LOC105375151 [ Homo sapiens (human) ]

Gene ID: 105375151, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105375151
Gene description
uncharacterized LOC105375151
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375151 in Genome Data Viewer
Location:
7p21.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (11583893..11591556)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (11714886..11722549)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene nucleophosmin 1 pseudogene 11 Neighboring gene uncharacterized LOC124901590 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:11432079-11432579 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:11449574-11449781 Neighboring gene thrombospondin type 1 domain containing 7A Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:11537706-11538206 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:11538207-11538707 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17976 Neighboring gene Sharpr-MPRA regulatory region 6026 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:11871421-11871961 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:11871962-11872501 Neighboring gene THRAP3 pseudogene 3 Neighboring gene uncharacterized LOC124901589 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:12105584-12106783

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    11583893..11591556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001744904.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    11714886..11722549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078260.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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