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LOC105375166 uncharacterized LOC105375166 [ Homo sapiens (human) ]

Gene ID: 105375166, updated on 10-Oct-2023

Summary

Gene symbol
LOC105375166
Gene description
uncharacterized LOC105375166
See related
Ensembl:ENSG00000237070
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in small intestine (RPKM 1.5), duodenum (RPKM 1.4) and 6 other tissues See more
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Genomic context

Location:
7p21.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (15667947..15681980)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (15801229..15815245)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (15707572..15721605)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene alkylglycerol monooxygenase Neighboring gene uncharacterized LOC124901592 Neighboring gene Sharpr-MPRA regulatory region 14752 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:15557538-15558346 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:15586656-15587206 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:15587207-15587755 Neighboring gene uncharacterized LOC124901591 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:15638304-15638834 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:15638835-15639363 Neighboring gene mesenchyme homeobox 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:15724672-15725504 Neighboring gene long intergenic non-protein coding RNA 2587 Neighboring gene ribosomal protein L36a pseudogene 26

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134258.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005550, BX538274
    Related
    ENST00000451240.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    15667947..15681980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    15801229..15815245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)