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SV2C-AS1 SV2C antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105379041, updated on 10-Oct-2023

Summary

Official Symbol
SV2C-AS1provided by HGNC
Official Full Name
SV2C antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55583
See related
AllianceGenome:HGNC:55583
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
5q13.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (76081406..76083417, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (76562780..76564788, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene synaptic vesicle glycoprotein 2C Neighboring gene spermine synthase pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:75378019-75378572 Neighboring gene MPRA-validated peak5296 silencer Neighboring gene SAP18 pseudogene 1 Neighboring gene RNA, 5S ribosomal pseudogene 186 Neighboring gene RAP1B like (pseudogene)

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_183290.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC026774

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    76081406..76083417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    76562780..76564788 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)