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Mmp12 matrix metallopeptidase 12 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 106021702, updated on 13-Mar-2024

Summary

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Gene symbol
Mmp12
Gene description
matrix metallopeptidase 12
See related
EnsemblRapid:ENSMAUG00000008249
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429217.1 (5110282..5120952)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801675.1 (5417015..5424544)

NW_024429217.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S6-like Neighboring gene matrix metallopeptidase 13 Neighboring gene uncharacterized LOC121135622 Neighboring gene stromelysin-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
macrophage metalloelastase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429217.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    5110282..5120952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040734775.1 → XP_040590709.1  macrophage metalloelastase

    UniProtKB/TrEMBL
    A0A3Q0CXR9
    Related
    ENSMAUP00000006252.2, ENSMAUT00000010052.2
    Conserved Domains (3) summary
    cd00094
    Location:272 → 461
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:100 → 255
    Peptidase_M10; Matrixin
    pfam01471
    Location:21 → 76
    PG_binding_1; Putative peptidoglycan binding domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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