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LINC01037 long intergenic non-protein coding RNA 1037 [ Homo sapiens (human) ]

Gene ID: 106144535, updated on 10-Oct-2023

Summary

Official Symbol
LINC01037provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1037provided by HGNC
Primary source
HGNC:HGNC:49025
See related
AllianceGenome:HGNC:49025
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
1q31.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (187443628..187477222)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (186798141..186831729)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (187412760..187446354)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1649 Neighboring gene phospholipase A2 group IVA Neighboring gene MPRA-validated peak520 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr1:186954018-186954519 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:187016203-187016870 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2251 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2252 Neighboring gene long intergenic non-protein coding RNA 1036 Neighboring gene uncharacterized LOC105371655 Neighboring gene MPRA-validated peak523 silencer Neighboring gene MPRA-validated peak525 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:187366310-187367033 Neighboring gene MPRA-validated peak527 silencer Neighboring gene Sharpr-MPRA regulatory region 13721 Neighboring gene uncharacterized LOC105371656 Neighboring gene farnesyl diphosphate synthase pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132374.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL391813, BG182723

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    187443628..187477222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    186798141..186831729
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)