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RNU6-520P RNA, U6 small nuclear 520, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481345, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-520Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 520, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47483
See related
Ensembl:ENSG00000207448 AllianceGenome:HGNC:47483
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q13.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (70701755..70701858)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (74044221..74044324)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (71567472..71567575)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927297 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:71553174-71554144 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:71554145-71555113 Neighboring gene UTP3 small subunit processome component Neighboring gene H3K27ac hESC enhancers GRCh37_chr4:71570032-71570564 and GRCh37_chr4:71571098-71571629 Neighboring gene RNA, U6 small nuclear 784, pseudogene Neighboring gene RUN and FYVE domain containing 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21602 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:71611261-71611762 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:71611763-71612262 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15469

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044439.1 

    Range
    101..204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    70701755..70701858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    74044221..74044324
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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