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RNU6-1086P RNA, U6 small nuclear 1086, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481934, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-1086Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1086, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48049
See related
Ensembl:ENSG00000222862 AllianceGenome:HGNC:48049
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8p21.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (27679836..27679935)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (27957217..27957316)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (27537353..27537452)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901919 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:27450407-27450907 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:27466546-27467252 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:27467959-27468666 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:27470630-27470815 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:27471849-27472348 Neighboring gene clusterin Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19050 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:27473305-27473805 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:27474096-27474852 Neighboring gene microRNA 6843 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:27491053-27491882 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:27491883-27492711 Neighboring gene scavenger receptor class A member 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:27508580-27509080 Neighboring gene uncharacterized LOC124901921 Neighboring gene uncharacterized LOC124901920 Neighboring gene microRNA 3622b Neighboring gene microRNA 3622a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043022.1 

    Range
    101..200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    27679836..27679935
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    27957217..27957316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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