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SNORA107 small nucleolar RNA, H/ACA box 107 [ Homo sapiens (human) ]

Gene ID: 106635542, updated on 10-Oct-2023

Summary

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Official Symbol
SNORA107provided by HGNC
Official Full Name
small nucleolar RNA, H/ACA box 107provided by HGNC
Primary source
HGNC:HGNC:51400
See related
AllianceGenome:HGNC:51400
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q31.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (84783654..84783778)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (84028304..84028428)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (85357789..85357913)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 333 Neighboring gene uncharacterized LOC105370289 Neighboring gene MT-ND6 pseudogene 37 Neighboring gene MT-ND5 pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:85180373-85180872 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:85228175-85228942 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:85228943-85229711 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:85229712-85230479 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:85258624-85259823 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:85406265-85406764 Neighboring gene uncharacterized LOC105370290 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:85501328-85501838 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:85682226-85682726 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:85682727-85683227 Neighboring gene long intergenic non-protein coding RNA 375 Neighboring gene uncharacterized LOC105370291

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The coilin interactome identifies hundreds of small noncoding RNAs that traffic through Cajal bodies. Machyna M, et al. Mol Cell, 2014 Nov 6. PMID 25514182

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132852.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL603887

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    84783654..84783778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    84028304..84028428
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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