Format

Send to:

Choose Destination

AW112010 expressed sequence AW112010 [ Mus musculus (house mouse) ]

Gene ID: 107350, updated on 23-Jun-2021

Summary

Official Symbol
AW112010provided by MGI
Official Full Name
expressed sequence AW112010provided by MGI
Primary source
MGI:MGI:2147706
See related
Ensembl:ENSMUSG00000075010
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in large intestine adult (RPKM 65.3), liver adult (RPKM 57.5) and 14 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See AW112010 in Genome Data Viewer
Location:
19; 19 A
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (11024976..11027930, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (11047612..11050566, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11122102..11125056, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene membrane-spanning 4-domains, subfamily A, member 18 Neighboring gene predicted gene 28347 Neighboring gene membrane-spanning 4-domains, subfamily A, member 8A Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_102366.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA467412, AC148991, BE851841, EH107460
    Related
    ENSMUST00000099676.5

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    11024976..11027930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001177351.1: Suppressed sequence

    Description
    NM_001177351.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
Support Center