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LOC107811318 rapid alkalinization factor [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107811318, updated on 31-Jan-2024

Summary

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Gene symbol
LOC107811318
Gene description
rapid alkalinization factor
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
NtRALF
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015951781.1 (31817..32588)

NW_015951781.1Genomic Context describing neighboring genes Neighboring gene desiccation-related protein PCC13-62-like Neighboring gene pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015951781.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RALF, a 5-kDa ubiquitous polypeptide in plants, arrests root growth and development. Pearce G, et al. Proc Natl Acad Sci U S A, 2001 Oct 23. PMID 11675511, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
rapid alkalinization factor
Names
RALF

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001425932.1 → NP_001412861.1  rapid alkalinization factor precursor

    Status: VALIDATED

    Source sequence(s)
    FG641190, GBEA01011609
    UniProtKB/Swiss-Prot
    Q945T0
    UniProtKB/TrEMBL
    A0A1S4BS67

RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015951781.1 Reference Ntab-TN90 Primary Assembly

    Range
    31817..32588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016636225.1 → XP_016491711.1  rapid alkalinization factor

    Conserved Domains (1) summary
    cl23823
    Location:4 → 114
    RALF; Rapid ALkalinization Factor (RALF)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q945T0.1 GenPept UniProtKB/Swiss-Prot:Q945T0

Gene LinkOut

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Molecular Biology Databases