Format

Send to:

Choose Destination

LOC107948867 steroid 5-alpha-reductase DET2 [ Gossypium hirsutum (cotton) ]

Gene ID: 107948867, updated on 7-Aug-2021

Summary

Gene symbol
LOC107948867
Gene description
steroid 5-alpha-reductase DET2
Locus tag
ERO13_A04G088000v2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Also known as
DET2; GhDET2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC107948867 in Genome Data Viewer
Location:
chromosome: A04
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A04 NC_053427.1 (75533969..75534861, complement)
100 previous assembly ASM98774v1 (GCF_000987745.1) 6 NC_030079.1 (67182578..67183610, complement)

Chromosome A04 - NC_053427.1Genomic Context describing neighboring genes Neighboring gene ataxin-3 homolog Neighboring gene acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like Neighboring gene mRNA-capping enzyme Neighboring gene protein DEFECTIVE IN EXINE FORMATION 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
steroid 5-alpha-reductase DET2
NP_001314480.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001327551.1NP_001314480.1  steroid 5-alpha-reductase DET2

    Status: PROVISIONAL

    Source sequence(s)
    DQ116446
    UniProtKB/Swiss-Prot
    Q2QDF6
    Conserved Domains (1) summary
    cl21511
    Location:1258
    PEMT; Phospholipid methyltransferase

RefSeqs of Annotated Genomes: Gossypium hirsutum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053427.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    75533969..75534861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center