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LOC107985558 uncharacterized LOC107985558 [ Homo sapiens (human) ]

Gene ID: 107985558, discontinued on 8-Apr-2022
  • This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.

Summary

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Gene symbol
LOC107985558
Gene description
uncharacterized LOC107985558
Gene type
ncRNA
RefSeq status
WITHDRAWN
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.
Expression
Broad expression in testis (RPKM 1.4), prostate (RPKM 1.1) and 24 other tissues See more
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Genomic context

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Location:
22q11.23
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 latest, but not current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (23909456..23926486, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    23909456..23926486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001755455.1 RNA Sequence

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187633.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    145818..162848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001756414.1 RNA Sequence