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LOC107987440 uncharacterized LOC107987440 [ Homo sapiens (human) ]

Gene ID: 107987440, updated on 10-Oct-2023

Summary

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Gene symbol
LOC107987440
Gene description
uncharacterized LOC107987440
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: only annotated on alternate loci in reference assembly
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 (ALT_REF_LOCI_3) NT_167245.2 (1015572..1027295)

NT_167245.2Genomic Context describing neighboring genes Neighboring gene HLA-F antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:29716125-29716632 Neighboring gene MHC class I polypeptide-related sequence E (pseudogene) Neighboring gene interferon induced transmembrane protein 4 pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:29726920-29727612 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:29747845-29748345 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:29757998-29759197 Neighboring gene major histocompatibility complex, class I, V (pseudogene) Neighboring gene HLA complex group 4 Neighboring gene HLA complex group 4 pseudogene 9 Neighboring gene major histocompatibility complex, class I, P (pseudogene)

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_167245.2 Chromosome 6 Reference GRCh38.p14 ALT_REF_LOCI_3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 ALT_REF_LOCI_3

Genomic

  1. NT_167245.2 Reference GRCh38.p14 ALT_REF_LOCI_3

    Range
    1015572..1027295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001756675.2 RNA Sequence

  2. XR_001756674.2 RNA Sequence

  3. XR_001756673.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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