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n-TItat14 nuclear encoded tRNA isoleucine 14 (anticodon TAT) [ Mus musculus (house mouse) ]

Gene ID: 108168120, updated on 16-Apr-2024

Summary

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Official Symbol
n-TItat14provided by MGI
Official Full Name
nuclear encoded tRNA isoleucine 14 (anticodon TAT)provided by MGI
Primary source
MGI:MGI:4413915
See related
AllianceGenome:MGI:4413915
Gene type
tRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
n-Ti14; n-TIaat14
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
13 A3.1; 13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (22081108..22081201, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (21896938..21897031, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA isoleucine 10 (anticodon AAT) Neighboring gene nuclear encoded tRNA pheylalanine 1 (anticodon GAA) Neighboring gene microRNA 1983 Neighboring gene predicted gene, 40830 Neighboring gene STARR-seq mESC enhancer starr_33876 Neighboring gene deoxynucleotidyltransferase, terminal, interacting protein 2 pseudogene Neighboring gene nuclear encoded tRNA lysine 23 (anticodon TTT)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Expression of the Neuronal tRNA n-Tr20 Regulates Synaptic Transmission and Seizure Susceptibility. Kapur M, et al. Neuron, 2020 Oct 14. PMID 32853550, Free PMC Article
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • tRNA-Ile-TAT-2-1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    22081108..22081201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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