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n-TMcat8 nuclear encoded tRNA methionine 8 (anticodon CAT) [ Mus musculus (house mouse) ]

Gene ID: 108168138, updated on 8-Feb-2024

Summary

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Official Symbol
n-TMcat8provided by MGI
Official Full Name
nuclear encoded tRNA methionine 8 (anticodon CAT)provided by MGI
Primary source
MGI:MGI:4413985
See related
AllianceGenome:MGI:4413985
Gene type
tRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
n-Tm8
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See n-TMcat8 in Genome Data Viewer
Location:
13 A3.1; 13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (22159202..22159273)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (21975032..21975103)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 184 (Kruppel-like) Neighboring gene Tu translation elongation factor, mitochondrial pseudogene Neighboring gene nuclear encoded tRNA lysine 22 (anticodon TTT) Neighboring gene STARR-positive B cell enhancer ABC_E7210 Neighboring gene POM121 transmembrane nucleoporin like 2 Neighboring gene nuclear encoded tRNA serine 8 (anticodon GCT)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    22159202..22159273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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Gene LinkOut

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