Gm21394 predicted gene, 21394 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Gm21394provided by MGI
Official Full Name: predicted gene, 21394provided by MGI
Primary source: MGI:MGI:5434749
See related: Ensembl:ENSMUSG00000094660 AllianceGenome:MGI:5434749
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary: Predicted to enable methylated histone binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:: Y; Y E

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	Y	NC_000087.8 (84573844..84576176, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	Y	NC_000087.7 (84562575..84564907, complement)

Chromosome Y - NC_000087.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables methylated histone binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in regulation of DNA-templated transcription	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC108168579

Names: Y-linked testis-specific protein 1-like; spermiogenesis specific transcript on the Y 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001378412.1 → NP_001365341.1 uncharacterized protein LOC108168579

Status: PREDICTED

Source sequence(s)

BC100414

UniProtKB/TrEMBL

Q04282, Q497R7, Q62456

Related

ENSMUSP00000141090.2, ENSMUST00000189463.2

Conserved Domains (1) summary

pfam02513
Location:21 → 69

Spin-Ssty; Spin/Ssty Family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000087.8 Reference GRCm39 C57BL/6J

Range

84573844..84576176 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001160140.1: Suppressed sequence

Description

NM_001160140.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein