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cpe carboxypeptidase E [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108260799, updated on 14-Mar-2024

Summary

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Gene symbol
cpe
Gene description
carboxypeptidase E
See related
Ensembl:ENSIPUG00000002712
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See cpe in Genome Data Viewer
Location:
chromosome: 29
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 29 NC_030444.2 (3164938..3182026, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 29 NC_030444.1 (2869782..2886477, complement)

Chromosome 29 - NC_030444.2Genomic Context describing neighboring genes Neighboring gene tolloid-like 1 Neighboring gene uncharacterized LOC108260757 Neighboring gene methylsterol monooxygenase 1 Neighboring gene kelch-like family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030444.2 Reference Coco_2.0 Primary Assembly

    Range
    3164938..3182026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017461389.3 → XP_017316878.1  carboxypeptidase E

    UniProtKB/TrEMBL
    A0A2D0QDX4
    Related
    ENSIPUP00000003851.1
Nucleotide Protein
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Gene LinkOut

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